eDNA Analysis Recipes
Results for eDNA Occupancy modeling: Fungal Pathogen Detection Data, Fungal Pathogen Metadata, ~ frogs, ~ 1, ~ 1
Completed
•
Runtime 5 seconds
•
updated 4.4 years ago
by
Istvan Albert
Results generated by running the recipe.
Parameters used during the run:
- eDNA detection data:Fungal Pathogen Detection Data
- Metadata:Fungal Pathogen Metadata
- Site Covariates:~ frogs
- Sample Covariates:~ 1
- Site and Sample Covariates:~ 1
File List
Files created by the recipe run:
plot.pdf
4.9 KB
posterior_summary.txt
655 bytes
recipe.sh
3.4 KB
runlog/input.json
3.4 KB
runlog/stderr.txt
0 bytes
runlog/stdout.txt
1.2 KB
Output Messages
Messages printed to the standard output stream:
Begin MCMC sampling:
..... drawing sample # 100 after 0.007265639 minutes
..... drawing sample # 200 after 0.01515194 minutes
..... drawing sample # 300 after 0.02258539 minutes
..... drawing sample # 400 after 0.03029215 minutes
..... drawing sample # 500 after 0.03782702 minutes
..... drawing sample # 600 after 0.0455835 minutes
..... drawing sample # 700 after 0.05315739 minutes
..... drawing sample # 800 after 0.06058527 minutes
..... drawing sample # 900 after 0.06749219 minutes
..... drawing sample # 1000 after 0.07441793 minutes
..... drawing sample # 1100 after 0.08139563 minutes
Completed 1100 draws of MCMC algorithm
Bayesian estimates of model parameters
Mean 50% 2.5% 97.5%
beta.(Intercept) 1.382 1.291 0.597 2.164
beta.frogs 0.819 0.699 -0.351 2.119
alpha.(Intercept) -0.065 -0.074 -0.415 0.241
delta.(Intercept) 1.087 1.084 0.565 1.445
Monte Carlo SE of Bayesian estimates
Mean 50% 2.5% 97.5%
beta.(Intercept) 0.0998 0.1100 0.0645 0.0000
beta.frogs 0.1336 0.1608 0.2485 0.0000
alpha.(Intercept) 0.0165 0.0186 0.0794 0.0461
delta.(Intercept) 0.0124 0.0173 0.1098 0.0401
null device
1
Other Messages
Messages printed to the standard error stream:
Powered by the
release 2.3.6