20013 + 0 in total (QC-passed reads + QC-failed reads) 0 + 0 secondary 13 + 0 supplementary 0 + 0 duplicates 20013 + 0 mapped (100.00% : N/A) 20000 + 0 paired in sequencing 10000 + 0 read1 10000 + 0 read2 19512 + 0 properly paired (97.56% : N/A) 20000 + 0 with itself and mate mapped 0 + 0 singletons (0.00% : N/A) 0 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)