Connected to NCBI The contents of 16SMicrobial.tar.gz are up to date in your system. *** The first ten lines of accession number NR_026093 >NR_026093.1 Atopobium parvulum strain VPI 0546 16S ribosomal RNA gene, partial sequence GCGAACGGCTGAGTAACACGTGGGCAACCTGCCCCTTTCATTGGGATAGCCACGGGAAACCGTGATAATACCGAATACTT CGAGACTTCCGCATGGAAGACTCGAGAAAGCTCCGGCGGAGAGGGATGGCCCGCGGCCTGTTAGCTTGTTGGTGGGGTAA CGGCCTACCAAGGCAATGATGGGTAGCTGGGTTGAGAGACCGACCAGCCAGATTGGGACTGAGACACGGCCCAGACTCCT ACGGGAGGCAGCAGTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGATGAAGGCCTTCG GGTTGTAAACCGCTTTCAGCAGGGACGAGGCGAAAGTGACGGTACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCA GCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTCATTGGGCGTAAAGCGCTCGTAGGCGGTCTGTTAGGTCGGGA GTTAAATCCGGGGGCTCAACCCCCGCTCGCTCTCGATACCGGCAGACTTGAGTTTGGTAGGGGAAGGTGGAATTCCTAGT GTAGCGGTGGAATGCGCAGATATTAGGAAGAACACCAGTGGCGAAGGCGGCCTTCTGGGCCATAACTGACGCTGAGGAGC GAAAGCTAGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCTAGCCGTAAACGATGGACACTAGGTGTGGGGGAGTATT *** Limit to the first 20 bases: >NR_026093.1 Atopobium parvulum strain VPI 0546 16S ribosomal RNA gene, partial sequence GCGAACGGCTGAGTAACACG *** Dump all sequences of the database into file all.fa *** Format the output using a format string: accession number and sequence length NR_118889.1 1300 NR_118899.1 1367 NR_074334.1 1492 NR_118873.1 1492 NR_119237.1 1492 NR_118890.1 1331 NR_044838.1 1454 NR_118908.1 1343 NR_118900.1 1376 NR_044822.1 1255 *** How many database sequences in the database 20748 *** Top 10 common gene sequence starts: 1903 AGAGTTTGATCCTGGCTCAG 1243 GACGAACGCTGGCGGCGTGC 591 ATTGAACGCTGGCGGCAGGC 415 GATGAACGCTAGCGGCAGGC 339 ATTCCGGTTGATCCTGCCGG 336 AACGAACGCTGGCGGCAGGC 331 AGAGTTTGATCATGGCTCAG 273 ATTGAACGCTGGCGGCATGC 236 ACGAACGCTGGCGGCGTGCT 215 TAGAGTTTGATCCTGGCTCA *** Building the blast database Building a new DB, current time: 10/08/2018 14:55:04 New DB name: /export/sites/biostar-engine/export/media/jobs/job-15debb58/xdb/my16S New DB title: all.fa Sequence type: Nucleotide Keep MBits: T Maximum file size: 1000000000B Adding sequences from FASTA; added 20470 sequences in 0.674629 seconds. *** Top 10 common gene sequence starts using the newly created database: 1903 AGAGTTTGATCCTGGCTCAG 1243 GACGAACGCTGGCGGCGTGC 591 ATTGAACGCTGGCGGCAGGC 415 GATGAACGCTAGCGGCAGGC 339 ATTCCGGTTGATCCTGCCGG 336 AACGAACGCTGGCGGCAGGC 331 AGAGTTTGATCATGGCTCAG 273 ATTGAACGCTGGCGGCATGC 236 ACGAACGCTGGCGGCGTGCT 215 TAGAGTTTGATCCTGGCTCA