FastQCFastQC Report
Tue 26 Feb 2019
SRR3191542.trimmed_2P.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3191542.trimmed_2P.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9469
Sequences flagged as poor quality0
Sequence length2-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTT110.11616855000528038No Hit
CTT100.10560777273207309No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)