FastQCFastQC Report
Wed 26 Sep 2018
SRR1972975.trimmed_2P.fq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1972975.trimmed_2P.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5285
Sequences flagged as poor quality0
Sequence length3-101
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATC190.3595080416272469No Hit
CAT60.11352885525070955No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)