FastQCFastQC Report
Wed 30 Sep 2020
SRR519926_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR519926_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1000
Sequences flagged as poor quality0
Sequence length251
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAAAAAGAAGAGATTGTTTTCGGCATAAATGTAGTTGGCAACGATGGAG30.3No Hit
TCTTCATTTTTTTCAGCACTTCAGCAGAAATCTGCGGCGGTGCCATTTTC20.2No Hit
TAGGCAATGATAGAAGGCGTGGTGCGATCGCCTTCGGCGTTCTCCAGCAC20.2No Hit
ACAAATTATTGGCAAAAGGTGTGTCGCATTTGCTTTCCAGCCAACTGACC20.2No Hit
GGCAGAGACATTCAGTCTCAACAACCTCGGACGCTTTGCCGATAAGCTGC20.2No Hit
TACCAATTTGACCGCCATTTTACTGCTCTCGCCTGTGGTTCATACCATTG20.2No Hit
TATTACAATTTTTTGATGAATGCCTTGGCTGCGATTCATTCTTTATATGA20.2No Hit
GACGCCATGAAGACCGCGAGTGATTGCCAGCAGAGTAAAGACAGCGAGAA20.2No Hit
GCACCACCAGTTCGCCTTTTTCATTACCGGCGGTGAAACCTGCCATCAGC20.2No Hit
AGAGATGGAAACTAAGCCAATACGTAAAGTATTCATCAAGATTTTTCCGT20.2No Hit
TACTGAACGAGCAGTTTGGTCGCACCGTTCTGCCGATTGGTGAATCCCAC20.2No Hit
GCCAGCGGGAACCCCGGCTGGGCGGCGGCGAGTCCCGTCAAAAGTTCGGC20.2No Hit
GATCTGGTGTTTGCGGATCTGCACCTTCGCAACGGTCATCGGCGGCACCT20.2No Hit
GTTACCGGTTCACCCAGGTAATCTTCAGCGGTTTTCTTCATTTTTTTCAG20.2No Hit
AAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATT20.2No Hit
GGTTTGATGAGTGGCTGTGGGTGCTGGCGTATCCGGGGATTAAAGTCTCG20.2No Hit

[FAIL]Adapter Content

Adapter graph