Bioinformatics Data Analysis
How to analyze the Zika RNA-Seq data with kallisto

This recipe performs an RNA Seq analysis of the Zika data using a classification based method

1 result • updated 7 months ago by Bioinformatics Admin

This recipe performs an RNA Seq analysis of the Zika data using a classification based method

This recipe reproduces the data analysis of published research.

Downloading the human reference files is not included in the recipe. These are a more substantial download and should be done only once then reused for different recipes.

To get the human genomic build and the human reference files use the zika-references.sh helper script:

 # Download the helper script
 wget http://data.biostarhandbook.com/redo/zika/zika-references.sh

 # Run the helper script to get the human genomic builds.
 bash zika-references.sh

Then run this recipe.

For more information see the

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