Bioinformatics Data Analysis
How to generate variant calls with bcftools

This recipe demonstrates variant call generation using bcftools and simulated data.

1 result • updated 15 months ago by Istvan Albert

This recipe demonstrates variant call generation using bcftools and simulated data.

When using simulations the variants will be known and we can use the process to evaluate the accuracy of the variant caller.

The installation commands in the book do not include dwgsim. It will need to be installed separately with:

conda install dwgsim

For more information see the

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