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Applied Bioinformatics Course Recipes
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21
Recipes
18
Results
Results for Variant calling with bcftools: AF086833, SRR1972739
Results generated by running the recipe.
Completed
• Runtime 10 seconds
• updated 23 months ago by
Istvan Albert
Results for Variant calling with freebayes: AF086833, 100000
Results generated by running the recipe.
Completed
• Runtime 2 seconds
• updated 23 months ago by
Istvan Albert
Results for Variant calling with bcftools: AF086833, SRR1972739
Results generated by running the recipe.
Completed
• Runtime 10 seconds
• updated 23 months ago by
Istvan Albert
Results for Alignment based RNA-Seq
Results generated by running the recipe.
Completed
• Runtime 27 seconds
• updated 2.8 years ago by
Istvan Albert
Results for A curious case of variant calling errors
Results generated by running the recipe.
Completed
• Runtime 4 seconds
• updated 2.8 years ago by
Istvan Albert
Results for Mission Impossible: Multi Sample Variant Calling in 60 seconds: PRJNA257197, KJ660346, 5
Results generated by running the recipe.
Completed
• Runtime 40 seconds
• updated 2.8 years ago by
Istvan Albert
Results for How to run the BWA short read aligner: AF086833, SRR1972739
Results generated by running the recipe.
Completed
• Runtime 11 seconds
• updated 2.9 years ago by
Istvan Albert
Results for Bacterial variant calling with filtering: NZ_CP008918, SRR4124989
Results generated by running the recipe.
Completed
• Runtime 1 minutes
• updated 2.9 years ago by
Istvan Albert
Results for Large Scale Genomic Variation: AF086833
Results generated by running the recipe.
Completed
• Runtime 1 seconds
• updated 2.9 years ago by
Istvan Albert
Results for How to download sequencing data via Entrez Direct: PRJNA272617, AF086833
Results generated by running the recipe.
Completed
• Runtime 8 seconds
• updated 2.9 years ago by
Istvan Albert
Results for How to run the BOWTIE short read aligner: AF086833, SRR1972739
Results generated by running the recipe.
Completed
• Runtime 8 seconds
• updated 2.9 years ago by
Istvan Albert
Results for How to run the BWA short read aligner: AF086833, SRR1972739
Results generated by running the recipe.
Completed
• Runtime 12 seconds
• updated 2.9 years ago by
Istvan Albert
Results for How to create and query a custom BLAST database
Results generated by running the recipe.
Completed
• Runtime 19 seconds
• updated 2.9 years ago by
Istvan Albert
Results for How to inspect the contents of a BLAST databases
Results generated by running the recipe.
Completed
• Runtime 3 seconds
• updated 2.9 years ago by
Istvan Albert
Results for How to use BLAST to identify a viral sequence
Results generated by running the recipe.
Completed
• Runtime 11 seconds
• updated 3.0 years ago by
Istvan Albert
Results for How to trim adapters from paired end FASTQ data: SRR519926
Results generated by running the recipe.
Completed
• Runtime 19 seconds
• updated 3.0 years ago by
Istvan Albert
Results for How to trim adapters from microRNA data: PRJNA272617, TGGAATTCTCGGGTGCCAAGG
Results generated by running the recipe.
Completed
• Runtime 14 seconds
• updated 3.0 years ago by
Istvan Albert
Results for Lecture 10: Quality control of sequencing data: SRR519926
Results generated by running the recipe.
Completed
• Runtime 23 seconds
• updated 3.0 years ago by
Istvan Albert
18 results • Page
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